ProSE.cpp File Reference

#include <OpenMS/ANALYSIS/ID/ProSEAlgorithm.h>
#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/CONCEPT/LogStream.h>
#include <OpenMS/DATASTRUCTURES/ListUtils.h>
#include <OpenMS/FORMAT/FASTAFile.h>
#include <OpenMS/FORMAT/FileHandler.h>
#include <OpenMS/FORMAT/FileTypes.h>
#include <OpenMS/FORMAT/ModificationDefinitionIO.h>
#include <OpenMS/FORMAT/QPXFile.h>
#include <OpenMS/FORMAT/ProteinGroupArrowExport.h>
#include <OpenMS/FORMAT/ProteinIdentificationArrowIO.h>
#include <OpenMS/FORMAT/ArrowIOHelpers.h>
#include <OpenMS/METADATA/ProteinIdentification.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/SYSTEM/File.h>
#include <OpenMS/SYSTEM/StopWatch.h>
#include <OpenMS/METADATA/PeptideIdentificationList.h>
#include <OpenMS/FORMAT/PercolatorInfile.h>
#include <algorithm>
#include <fstream>
#include <iomanip>
#include <sstream>
#include <map>
#include <set>