Percolator Member List

This is the complete list of members for Percolator, including all inherited members.

check_defaults_	DefaultParamHandler	protected
DefaultParamHandler(const std::string &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
DefaultParamHandler()	DefaultParamHandler	private
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
error_name_	DefaultParamHandler	protected
fillPINCompatibleFields(const std::vector< PeptideIdentification > &peptide_ids, bool flatten_hits, RescoreInput &input)	Percolator	static
getDefaults() const	DefaultParamHandler
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getPi0() const	Percolator
getSubsections() const	DefaultParamHandler
getSvmWeights() const	Percolator
impl_	Percolator	private
loadModel(const std::string &filename)	Percolator	static
operator=(const Percolator &)=delete	Percolator
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)	DefaultParamHandler
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
Percolator()	Percolator
Percolator(const Percolator &)=delete	Percolator
rescore(std::vector< PeptideIdentification > &peptide_ids, const StringList &feature_names={})	Percolator
rescore(const RescoreInput &input)	Percolator
rescorePSMs(PeptideIdentificationList &peptide_ids, const StringList &feature_set, const std::string &enzyme, int min_charge, int max_charge, const std::string &score_type="q-value")	Percolator
saveModel(const PercolatorModel &model, const std::string &filename)	Percolator	static
score(const RescoreInput &input, const PercolatorModel &model)	Percolator
score(const RescoreInput &input, const PercolatorModel &model, const RescoreInput &reference)	Percolator
score_(const RescoreInput &input, const PercolatorModel &model, ReferenceScale_ *scale)	Percolator	private
scorePSMs(PeptideIdentificationList &peptide_ids, const PercolatorModel &model, PeptideIdentificationList &reference_ids, const StringList &feature_set, const std::string &enzyme, int min_charge, int max_charge, const std::string &score_type="q-value")	Percolator
setName(const std::string &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
subsections_	DefaultParamHandler	protected
train(const RescoreInput &input)	Percolator
trainPSMs(PeptideIdentificationList &peptide_ids, const StringList &feature_set, const std::string &enzyme, int min_charge, int max_charge)	Percolator
updateMembers_() override	Percolator	protectedvirtual
usedDefaultDirection() const	Percolator
warn_empty_defaults_	DefaultParamHandler	protected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const std::string &key_prefix="")	DefaultParamHandler	static
~DefaultParamHandler()	DefaultParamHandler	virtual
~Percolator() override	Percolator