MultiplexResolverAlgorithm Member List

This is the complete list of members for MultiplexResolverAlgorithm, including all inherited members.

check_defaults_	DefaultParamHandler	protected
completeConsensus_(const ConsensusFeature &consensus, const std::vector< MultiplexDeltaMasses::DeltaMass > &pattern, const std::vector< bool > &delta_mass_matched, int index_label_set, const MSExperiment &blacklist) const	MultiplexResolverAlgorithm	protected
DefaultParamHandler(const std::string &name)	DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)	DefaultParamHandler
DefaultParamHandler()	DefaultParamHandler	private
defaults_	DefaultParamHandler	protected
defaultsToParam_()	DefaultParamHandler	protected
deltaMassFromMapIndex_(const ConsensusFeature::HandleSetType &feature_handles, unsigned idx)	MultiplexResolverAlgorithm	protectedstatic
error_name_	DefaultParamHandler	protected
findMatchingPattern_(const ConsensusFeature &consensus, const MultiplexDeltaMasses::LabelSet &label_set, const std::vector< MultiplexDeltaMasses > &theoretical_patterns, std::vector< bool > &delta_mass_matched, int &index_label_set) const	MultiplexResolverAlgorithm	protected
findNewMZ_(double mz, int charge, const std::vector< MultiplexDeltaMasses::DeltaMass > &pattern, const std::vector< bool > &delta_mass_matched)	MultiplexResolverAlgorithm	protectedstatic
getDefaults() const	DefaultParamHandler
getName() const	DefaultParamHandler
getParameters() const	DefaultParamHandler
getSubsections() const	DefaultParamHandler
isBlacklisted_(const MSExperiment &blacklist, double rt, double mz, size_t charge, const ConsensusFeature &consensus) const	MultiplexResolverAlgorithm	protected
mass_tolerance_	MultiplexResolverAlgorithm	protected
matchDeltaMasses_(const ConsensusFeature &consensus, const std::vector< MultiplexDeltaMasses::DeltaMass > &pattern, double theoretical_delta_mass_at_label_set, std::vector< bool > &delta_mass_matched) const	MultiplexResolverAlgorithm	protected
matchLabelSet_(const std::vector< MultiplexDeltaMasses::DeltaMass > &pattern, const MultiplexDeltaMasses::LabelSet &label_set, int &index_label_set)	MultiplexResolverAlgorithm	protectedstatic
MultiplexResolverAlgorithm()	MultiplexResolverAlgorithm
mz_tolerance_	MultiplexResolverAlgorithm	protected
operator=(const DefaultParamHandler &rhs)	DefaultParamHandler
operator==(const DefaultParamHandler &rhs) const	DefaultParamHandler	virtual
param_	DefaultParamHandler	protected
resolve(const ConsensusMap &map_in, ConsensusMap &map_out, ConsensusMap &map_conflicts, const MSExperiment &blacklist=MSExperiment()) const	MultiplexResolverAlgorithm
rt_tolerance_	MultiplexResolverAlgorithm	protected
setName(const std::string &name)	DefaultParamHandler
setParameters(const Param &param)	DefaultParamHandler
subsections_	DefaultParamHandler	protected
updateMembers_() override	MultiplexResolverAlgorithm	protectedvirtual
warn_empty_defaults_	DefaultParamHandler	protected
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const std::string &key_prefix="")	DefaultParamHandler	static
~DefaultParamHandler()	DefaultParamHandler	virtual