NuXLIonLikelihood Member List

This is the complete list of members for NuXLIonLikelihood, including all inherited members.

addTraining(Size fold, const Evidence &evidence)	NuXLIonLikelihood
finalize()	NuXLIonLikelihood
Group enum name	NuXLIonLikelihood
GROUPS enum value	NuXLIonLikelihood
LINEAR enum value	NuXLIonLikelihood
match(Size scan, const AASequence &peptide, int precursor_charge, const std::vector< double > &shifts, int site) const	NuXLIonLikelihood
matchHypothesis_(Size scan, const AASequence &peptide, int precursor_charge, const std::vector< double > &shifts, int site) const	NuXLIonLikelihood	private
max_fragment_charge_	NuXLIonLikelihood	private
Model typedef	NuXLIonLikelihood
models_	NuXLIonLikelihood	private
NuXLIonLikelihood(double tolerance, bool ppm, int max_fragment_charge=2)	NuXLIonLikelihood
peaks_	NuXLIonLikelihood	private
ppm_	NuXLIonLikelihood	private
resetFold(Size fold)	NuXLIonLikelihood
reversedSequence(const AASequence &peptide)	NuXLIonLikelihood	static
score(Size fold, const Outcomes &outcomes) const	NuXLIonLikelihood
setSpectra(const PeakMap &spectra)	NuXLIonLikelihood
tolerance_	NuXLIonLikelihood	private
tsg_	NuXLIonLikelihood	private
XL_SHIFTED enum value	NuXLIonLikelihood
XL_UNLOCALIZED enum value	NuXLIonLikelihood
XL_UNSHIFTED enum value	NuXLIonLikelihood