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NuXLSiteLocalization Member List

This is the complete list of members for NuXLSiteLocalization, including all inherited members.

DEFAULT_TOLERANCENuXLSiteLocalizationstatic
digestProtein(const EnzymaticDigestion &digestion, std::string_view protein, size_t min_length, size_t max_length, bool clip_nterm_methionine, std::vector< std::string_view > &peptides)NuXLSiteLocalizationstatic
isProteinCTerminal(const ProteinTermini &termini, std::string_view peptide)NuXLSiteLocalizationstatic
isProteinNTerminal(const ProteinTermini &termini, std::string_view peptide)NuXLSiteLocalizationstatic
localizeNHS(const std::string &sequence, bool reactive_protein_n_term, const std::vector< double > &n_shifts, const std::vector< double > &n_noshifts, const std::vector< double > &c_shifts, const std::vector< double > &c_noshifts, double tolerance=DEFAULT_TOLERANCE, const std::vector< bool > &blocked={})NuXLSiteLocalizationstatic
proteinTermini(const std::vector< std::string_view > &proteins, const EnzymaticDigestion &digestion, size_t min_length, size_t max_length, bool clip_nterm_methionine)NuXLSiteLocalizationstatic
supportedResidues(const std::vector< double > &n_shifts, const std::vector< double > &n_noshifts, const std::vector< double > &c_shifts, const std::vector< double > &c_noshifts, double tolerance=DEFAULT_TOLERANCE)NuXLSiteLocalizationstatic