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QPXFile Member List

This is the complete list of members for QPXFile, including all inherited members.

exportPSMsToQPXArrow(const std::vector< ProteinIdentification > &protein_identifications, const PeptideIdentificationList &peptide_identifications, bool export_all_psms=false, const QPXIdentity::FeatureLinks *feature_links=nullptr)QPXFilestatic
exportToArrow(const std::vector< ProteinIdentification > &protein_identifications, const PeptideIdentificationList &peptide_identifications, bool export_all_psms=false)QPXFilestatic
exportToParquet(const std::vector< ProteinIdentification > &protein_identifications, const PeptideIdentificationList &peptide_identifications, const std::string &filename, bool export_all_psms=false, const ParquetWriteConfig &config=ParquetWriteConfig{}, const QPXIdentity::FeatureLinks *feature_links=nullptr)QPXFilestatic
exportToParquet(const std::shared_ptr< arrow::Table > &table, const std::string &filename, const ParquetWriteConfig &config=ParquetWriteConfig{}, const std::string &scan_format="")QPXFilestatic
exportToParquetStreaming(const std::vector< ProteinIdentification > &protein_identifications, const std::vector< const PeptideIdentification * > &peptide_identification_ptrs, const std::string &filename, bool export_all_psms=false, size_t batch_size=1000000, const ParquetWriteConfig &config=ParquetWriteConfig{}, int n_threads=1, const QPXIdentity::FeatureLinks *feature_links=nullptr)QPXFilestatic
importFromArrow(const std::shared_ptr< arrow::Table > &table, std::vector< ProteinIdentification > &protein_identifications, PeptideIdentificationList &peptide_identifications)QPXFilestatic
requireResolvableMergeIndices(const std::vector< ProteinIdentification > &protein_identifications, const PeptideIdentificationList &peptide_identifications)QPXFilestatic
requireResolvableMergeIndices(const std::vector< ProteinIdentification > &protein_identifications, const std::vector< const PeptideIdentification * > &peptide_identifications)QPXFilestatic