IonNaming.h File Reference

#include <OpenMS/CONCEPT/Types.h>
#include <OpenMS/OpenMSConfig.h>
#include <cctype>
#include <climits>
#include <string>

Go to the source code of this file.

Namespaces
namespace	OpenMS
	Main OpenMS namespace.
namespace	OpenMS::IonNaming
	Reading and writing the charge notation used in fragment ion names.

Functions
std::string	chargeSuffix (int charge)
	The charge notation to append to an ion name, e.g. "+" for 1, "--" for -2.
int	chargeFromName (const std::string &ion_name)
	The charge an ion name spells out, or 0 if it does not spell one.
std::string	withCharge (const std::string &ion_name, int charge)
	The ion name to display for a peak annotated with ion_name and charge.
UInt	ordinalFromName (const std::string &ion_name)
	The fragment ordinal an ion name spells out ("y12++" -> 12), or 0 if it does not spell one.

Variables
constexpr int	MAX_REPEATED_SIGNS = 8
	Largest charge magnitude still written as a run of signs.