Rendering classes of the configured modifications, for samePeptidoform_() (peptide:deduplicate) More...

#include <OpenMS/ANALYSIS/ID/FragmentIndex.h>

Public Member Functions
uint32_t	classOf (const ResidueModification *mod) const
	Class of `mod` (0 for nullptr or a modification not configured)

Public Attributes
std::vector< std::pair< const ResidueModification *, uint32_t > >	mod_class
	Modification -> class of its toString(); classes start at 256, above the residue bytes.

bool	runs_hold_peptidoforms {true}

bool	unique_variable_renderings {true}
	No two variable modifications render alike.

bool	slots_depend_on_context {false}
	A variable modification is protein-terminal: buildModSlots_() depends on where a peptide lies in its protein.

Detailed Description

Rendering classes of the configured modifications, for samePeptidoform_() (peptide:deduplicate)

Member Function Documentation

◆ classOf()

uint32_t classOf ( const ResidueModification * mod ) const

inline

Class of mod (0 for nullptr or a modification not configured)

Member Data Documentation

◆ mod_class

std::vector<std::pair<const ResidueModification*, uint32_t> > mod_class

Modification -> class of its toString(); classes start at 256, above the residue bytes.

◆ runs_hold_peptidoforms

bool runs_hold_peptidoforms {true}

Alike rendered modifications have the same mass and residue, and none is configured both fixed and variable: equal peptidoforms then have equal residues and bitwise equal precursor_mz_, i.e. lie in one run of equal precursor_mz_ after sortPeptides_().

◆ slots_depend_on_context

bool slots_depend_on_context {false}

A variable modification is protein-terminal: buildModSlots_() depends on where a peptide lies in its protein.

◆ unique_variable_renderings

bool unique_variable_renderings {true}

No two variable modifications render alike.

Public Member Functions

Public Attributes