NuXLRescoring::ScoreGap Struct Reference

Best score of the hits of a spectrum and the best score of a different (unmodified) peptide sequence. More...

#include <OpenNuXL/include/NuXLRescoring.h>

Public Member Functions
void	add (float score, std::string_view sequence)
float	bestOtherThan (std::string_view sequence) const
	best score of a sequence other than sequence (-inf if there is none)

Public Attributes
float	best = -std::numeric_limits<float>::infinity()
float	second = -std::numeric_limits<float>::infinity()
	best score of a sequence other than best_sequence
std::string_view	best_sequence

Detailed Description

Best score of the hits of a spectrum and the best score of a different (unmodified) peptide sequence.

Fed every hit scored for the spectrum in the search, in any order. bestOtherThan() then gives the exact best score of a sequence other than the given one, independent of the order of the hits.

Member Function Documentation

add()

void add ( float  score, std::string_view  sequence  )

inline

References NuXLRescoring::ScoreGap::best, NuXLRescoring::ScoreGap::best_sequence, and NuXLRescoring::ScoreGap::second.

bestOtherThan()

float bestOtherThan ( std::string_view  sequence ) const

inline

best score of a sequence other than sequence (-inf if there is none)

References NuXLRescoring::ScoreGap::best, NuXLRescoring::ScoreGap::best_sequence, and NuXLRescoring::ScoreGap::second.

Member Data Documentation

best

float best = -std::numeric_limits<float>::infinity()

Referenced by NuXLRescoring::ScoreGap::add(), and NuXLRescoring::ScoreGap::bestOtherThan().

best_sequence

std::string_view best_sequence

Referenced by NuXLRescoring::ScoreGap::add(), and NuXLRescoring::ScoreGap::bestOtherThan().

second

float second = -std::numeric_limits<float>::infinity()

best score of a sequence other than best_sequence

Referenced by NuXLRescoring::ScoreGap::add(), and NuXLRescoring::ScoreGap::bestOtherThan().