ConsensusMapNormalizerAlgorithmRTLocal.h File Reference

#include <OpenMS/KERNEL/ConsensusMap.h>
#include <string>
#include <vector>

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Classes
class	ConsensusMapNormalizerAlgorithmRTLocal
	Normalizes the maps of a consensus map by a per-map offset that may vary with retention time. More...
struct	ConsensusMapNormalizerAlgorithmRTLocal::Settings
	Settings of the normalization (all of them at least 1) More...

Namespaces
namespace	OpenMS
	Main OpenMS namespace.

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Class Documentation

OpenMS::ConsensusMapNormalizerAlgorithmRTLocal::Settings

struct OpenMS::ConsensusMapNormalizerAlgorithmRTLocal::Settings

Settings of the normalization (all of them at least 1)

Class Members
Size	min_maps = 3	a consensus feature is a reference feature with intensities in at least this many maps
Size	min_reference = 20	maps with fewer reference cells are not normalized
Size	neighbors = 50	reference cells on each side (in retention time) that estimate a cell's offset
Size	rounds = 5	backfitting rounds